STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI1106Putative outer membrane factor. (491 aa)    
Predicted Functional Partners:
acrA
Putative acriflavine resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.800
acrB
Putative acriflavine resistance protein B.
 
  0.786
GDI1108
Putative efflux transporter protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.724
mdtA-2
Putative multidrug resistance protein mdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.686
GDI1107
Putative transcriptional regulator protein, TetR family.
 
     0.657
GDI1109
Putative heavy metal efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.583
GDI0143
Putative secretion protein, HlyD-family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.563
GDI3839
Putative secretion protein, HlyD-family.
  
  0.520
GDI3719
Putative outer membrane protein.
  
  
  0.519
GDI1105
Putative HTH-type transcriptional regulator benM (Ben and cat opero transcriptional regulator); Belongs to the LysR transcriptional regulatory family.
       0.517
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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