STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI1109Putative heavy metal efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (938 aa)    
Predicted Functional Partners:
GDI1108
Putative efflux transporter protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.976
GDI1107
Putative transcriptional regulator protein, TetR family.
 
     0.859
GDI1110
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
       0.623
GDI0143
Putative secretion protein, HlyD-family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.613
GDI3719
Putative outer membrane protein.
  
 
  0.591
GDI2437
Secretion protein, HlyD-family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.587
mdtA
Putative multidrug resistance protein mdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.586
GDI1106
Putative outer membrane factor.
 
  0.583
mdtA-2
Putative multidrug resistance protein mdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.575
secD
Putative protein-export membrane protein secD.
     
 0.573
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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