STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI1158Putative thioesterase superfamily protein. (178 aa)    
Predicted Functional Partners:
GDI2620
Putative 4Fe-4S ferredoxin, iron-sulfur binding; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.882
GDI0518
Putative acyl-CoA thioester hydrolase.
     
 0.657
plsX
Putative fatty acid/phospholipid synthesis protein plsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.650
luxE
Putative long-chain-fatty-acid--luciferin-component ligase.
    
 0.619
GDI2396
Putative fatty acid synthase.
  
 
 0.605
GDI3054
Putative phenylacetic acid degradation protein PaaD.
  
 
 0.605
GDI0802
Putative acyl-CoA thioester hydrolase.
    
 0.575
GDI1156
Putative sodium cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.532
GDI1157
Putative beta-lactamase/acylhydrolase.
       0.532
paaF
Putative enoyl-CoA hydratase.
   
 0.529
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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