STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI1160Putative endo-1,3-1,4-beta-glycanase protein. (287 aa)    
Predicted Functional Partners:
bglX
Putative periplasmic beta-glucosidase precursor.
 
  
 0.789
GDI0606
Putative beta-N-acetylhexosaminidase.
 
  
  0.651
GDI2537
Putative endoglucanase precursor (EC 3.2.1.4) (Endo-1,4-beta-glucanase (Cellulase); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.633
GDI1159
Putative transmembrane acyltransferase.
       0.631
GDI3371
Putative glycosyl transferase.
     
 0.480
exoP
Putative succinoglycan biosynthesis transport protein exoP.
     
 0.472
LacI
Putative transcriptional regulator, LacI family.
  
     0.447
fruR
Putative fructose repressor.
  
     0.442
LacI-2
Putative transcriptional regulator, LacI family.
  
     0.401
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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