STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI1193Putative ABC tranporter protein. (250 aa)    
Predicted Functional Partners:
GDI1192
Putative ABC tranporter protein.
 
 
 0.970
GDI1194
Putative two-component system sensor protein.
 
  
 0.947
GDI1195
Putative two-component system regulatory protein.
 
   
 0.941
GDI3840
Putative ABC transporter component.
  
 
 0.679
ctrC
Putative capsule polysaccharide export inner-membrane protein ctrC.
    
  0.599
GDI2396
Putative fatty acid synthase.
  
  
 0.535
GDI3123
Putative thiamine transport ATP-binding protein.
  
 
 0.520
GDI1191
Putative endoribonuclease.
       0.471
GDI2637
Sugar uptake ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
     
 0.443
GDI0074
Putative nitroreductase family protein.
  
    0.421
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.