STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI1196Conserved hypothetical protein. (170 aa)    
Predicted Functional Partners:
cobT-2
Putative cobalamin biosynthesis protein cobT.
  
     0.680
GDI0926
Conserved hypothetical protein.
  
     0.629
GDI2982
Putative N-formylglutamate amidohydrolase.
  
     0.618
GDI3356
Conserved hypothetical protein.
  
     0.595
GDI1197
D-2-hydroxyacid dehydrogensase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.592
GDI3318
Putative DNA polymerase III.
  
     0.592
GDI1364
Conserved hypothetical protein.
  
     0.589
GDI1905
Conserved hypothetical protein.
  
     0.584
GDI0879
Conserved hypothetical protein.
  
     0.546
GDI3220
Putative oxidoreductase.
  
     0.499
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.