Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
GDI1613Putative secretion protein, HlyD-family. (383 aa)    
Predicted Functional Partners:
MFS
Putative transporter protein.
 
   0.938
GDI1612
Outer membrane protein.
  
  0.867
emrB
Putative multidrug resistance protein B; Belongs to the major facilitator superfamily.
   0.849
GDI2849
Putative multidrug resistance protein.
  
   0.848
GDI1000
Putative multidrug efflux transporter protein.
  
   0.838
GDI0235
Putative multidrug resistance protein.
  
   0.831
GDI0349
Putative drug resistance transporter; Belongs to the major facilitator superfamily.
 
   0.736
GDI3254
Putative transporter protein.
  
   0.689
tolC
Putative Outer membrane protein tolC precursor.
 
 0.659
GDI3719
Putative outer membrane protein.
 
 0.655
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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