Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
GDI1640Oxidoreductase. (354 aa)    
Predicted Functional Partners:
GDI1641
Conserved hypothetical protein.
  
    0.776
trpA
Putative Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.679
gabD
Succinate-semialdehyde dehydrogenase.
    
 0.650
aldA-3
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.650
GDI0816
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.650
aldA-4
Putative aldehyde dehydrogenase A; Belongs to the aldehyde dehydrogenase family.
    
 0.650
GDI1528
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.650
gabD-3
Succinate-semialdehyde dehydrogenase [NADP+].
    
 0.650
gabD-4
Putative succinate-semialdehyde dehydrogenase [NADP+].
    
 0.650
aldA
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.632
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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