STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motBPutative chemotaxis protein motB (Motility protein B). (368 aa)    
Predicted Functional Partners:
motA
Putative chemotaxis protein motA (Motility protein A).
 0.999
cheA
Putative chemotaxis protein cheA.
 
  
 0.984
cheA-2
Putative chemotaxis protein cheA.
  
  
 0.982
cheW
Putative chemotaxis protein cheW.
  
  
 0.980
flgC
Putative flagellar basal-body rod protein flgC.
 
  
 0.978
flgD
Putative basal-body rod modification protein flgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.975
GDI1696
Putative flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.973
flgH
Putative flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.962
fliG
Putative flagellar motor switch protein fliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.937
flgG
Putative flagellar basal-body rod protein flgG; Belongs to the flagella basal body rod proteins family.
 
 
 0.929
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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