STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI1895BolA-like protein; Belongs to the BolA/IbaG family. (131 aa)    
Predicted Functional Partners:
GDI1962
Putative monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.983
GDI1896
Putative outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
       0.773
dnaJ-3
Putative chaperone protein dnaJ.
   
   0.669
petC
Putative cytochrome c.
  
     0.528
nifU
Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
    
 
 0.498
cobS-2
Cobalt chelatase, pCobS small subunit; Putative aerobic cobaltochelatase cobS subunit (EC 6.6.1.2) (Hydrogenobyrini acid a,c-diamide cobaltochelatase cobS subunit.
       0.486
cobT-2
Putative cobalamin biosynthesis protein cobT.
       0.443
GDI3266
Putative aminomethyltransferase protein (glycine cleavage); Belongs to the GcvT family.
  
   
 0.439
GDI3069
Putative nucleoside diphosphate.
  
     0.428
rpoD-2
RNA polymerase sigma factor rpoD (Sigma-A); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
      
 0.416
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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