Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GDI1617 | cbbT | GDI1617 | GDI2301 | Phosphoketolase. | Putative transketolase; Belongs to the transketolase family. | 0.734 |
GDI1617 | eno | GDI1617 | GDI1927 | Phosphoketolase. | Enolase protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.871 |
GDI1617 | fbaB | GDI1617 | GDI0491 | Phosphoketolase. | Fructose-bisphosphate aldolase class 1. | 0.864 |
GDI1617 | gap | GDI1617 | GDI2302 | Phosphoketolase. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.883 |
GDI1617 | pykA | GDI1617 | GDI1290 | Phosphoketolase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.866 |
GDI1617 | tal | GDI1617 | GDI0286 | Phosphoketolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. | 0.946 |
GDI1617 | tktA | GDI1617 | GDI0285 | Phosphoketolase. | Putative outer membrane protein (pseudogene); Belongs to the transketolase family. | 0.734 |
GDI1617 | tpiA | GDI1617 | GDI1932 | Phosphoketolase. | Putative triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.889 |
cbbT | GDI1617 | GDI2301 | GDI1617 | Putative transketolase; Belongs to the transketolase family. | Phosphoketolase. | 0.734 |
cbbT | eno | GDI2301 | GDI1927 | Putative transketolase; Belongs to the transketolase family. | Enolase protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.881 |
cbbT | fbaB | GDI2301 | GDI0491 | Putative transketolase; Belongs to the transketolase family. | Fructose-bisphosphate aldolase class 1. | 0.765 |
cbbT | gap | GDI2301 | GDI2302 | Putative transketolase; Belongs to the transketolase family. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.969 |
cbbT | gpmI | GDI2301 | GDI3347 | Putative transketolase; Belongs to the transketolase family. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutas; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.757 |
cbbT | pgk | GDI2301 | GDI2303 | Putative transketolase; Belongs to the transketolase family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.911 |
cbbT | pykA | GDI2301 | GDI1290 | Putative transketolase; Belongs to the transketolase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.853 |
cbbT | tal | GDI2301 | GDI0286 | Putative transketolase; Belongs to the transketolase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. | 0.995 |
cbbT | tpiA | GDI2301 | GDI1932 | Putative transketolase; Belongs to the transketolase family. | Putative triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.872 |
eno | GDI1617 | GDI1927 | GDI1617 | Enolase protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Phosphoketolase. | 0.871 |
eno | cbbT | GDI1927 | GDI2301 | Enolase protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Putative transketolase; Belongs to the transketolase family. | 0.881 |
eno | fbaB | GDI1927 | GDI0491 | Enolase protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Fructose-bisphosphate aldolase class 1. | 0.936 |
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