Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GDI2275Putative signalling protein, GGDEF family. (700 aa)    
Predicted Functional Partners:
GDI3812
Putative signalling protein, GGDEF family.
 
0.989
GDI3286
Putative two-component sensor histidine kinase/response regulator hybrid protein.
  
 0.979
GDI1168
Conserved protein.
 
0.970
GDI1867
Putative signalling protein, GGDEF family.
 
0.966
GDI3168
Putative signalling protein, GGDEF family.
 
0.950
cheA-2
Putative chemotaxis protein cheA.
  
 0.948
GDI3640
Putative signalling protein, GGDEF family.
 
0.920
GDI3665
Putative signalling protein, GGDEF family.
 
 
0.900
GDI0833
Putative signalling protein, GGDEF family.
 
 
0.895
GDI3287
Putative histidine kinase.
   
 0.879
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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