STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI2313Putative ABC-type Fe3+ transport system periplasmic component. (314 aa)    
Predicted Functional Partners:
feuB
Putative ABC-type Fe3+ transport system permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.994
GDI2311
Putative ABC-type Fe3+ transport system ATP-binding component.
 
 0.990
btuC
Putative vitamin B12 import system permease protein btuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.969
GDI0665
Putative ferrichrome ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.966
fecE
Putative iron(III) dicitrate transport ATP-binding protein fecE.
 
 0.916
GDI2060
Putative iron ABC transporter ATP-binding protein.
 
 0.900
nifB
Putative FeMo cofactor biosynthesis protein nifB.
     
 0.615
nifV
Homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
   
  
 0.614
rpoN
RNA polymerase sigma-54 factor 1; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
      
 0.613
nifD
FeMo protein of nitrogenase alpha subunit; NifD.
     
 0.613
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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