STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI2348Putative amidohydrolase. (488 aa)    
Predicted Functional Partners:
hutH
Putative histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
  
 0.953
GDI2982
Putative N-formylglutamate amidohydrolase.
  
  
 0.803
GDI2347
Putative pyridine nucleotide-disulphide oxidoreductase.
       0.675
GDI2346
Conserved hypothetical protein.
     
 0.618
GDI0823
Dipeptidyl peptidase IV.
 
    0.609
GDI2345
Putative membrane protein.
       0.563
GDI2474
Transcriptional regulator, GntR family.
    
 0.532
GDI2689
Putative transcriptional regulator, GntR family.
    
 0.532
GDI1041
Conserved hypothetical protein.
 
    0.513
GDI2174
Putative transcriptional regulator.
    
 0.503
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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