Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GDI0649 | GDI0650 | GDI0649 | GDI0650 | Putative exported protein. | Putative iron permease protein. | 0.956 |
GDI0649 | clcA | GDI0649 | GDI2363 | Putative exported protein. | Putative H(+)/Cl(-) exchange transporter clcA. | 0.436 |
GDI0650 | GDI0649 | GDI0650 | GDI0649 | Putative iron permease protein. | Putative exported protein. | 0.956 |
GDI0650 | clcA | GDI0650 | GDI2363 | Putative iron permease protein. | Putative H(+)/Cl(-) exchange transporter clcA. | 0.413 |
GDI1646 | clcA | GDI1646 | GDI2363 | Putative flbA protein. | Putative H(+)/Cl(-) exchange transporter clcA. | 0.405 |
clcA | GDI0649 | GDI2363 | GDI0649 | Putative H(+)/Cl(-) exchange transporter clcA. | Putative exported protein. | 0.436 |
clcA | GDI0650 | GDI2363 | GDI0650 | Putative H(+)/Cl(-) exchange transporter clcA. | Putative iron permease protein. | 0.413 |
clcA | GDI1646 | GDI2363 | GDI1646 | Putative H(+)/Cl(-) exchange transporter clcA. | Putative flbA protein. | 0.405 |
clcA | fieF | GDI2363 | GDI2362 | Putative H(+)/Cl(-) exchange transporter clcA. | Putative Cation-efflux pump fieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.505 |
clcA | zitB | GDI2363 | GDI2361 | Putative H(+)/Cl(-) exchange transporter clcA. | Zinc transporter zitB. | 0.503 |
fieF | clcA | GDI2362 | GDI2363 | Putative Cation-efflux pump fieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Putative H(+)/Cl(-) exchange transporter clcA. | 0.505 |
fieF | zitB | GDI2362 | GDI2361 | Putative Cation-efflux pump fieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Zinc transporter zitB. | 0.922 |
zitB | clcA | GDI2361 | GDI2363 | Zinc transporter zitB. | Putative H(+)/Cl(-) exchange transporter clcA. | 0.503 |
zitB | fieF | GDI2361 | GDI2362 | Zinc transporter zitB. | Putative Cation-efflux pump fieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.922 |