STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI2402Putative capsular polysaccharide biosynthesis protein. (527 aa)    
Predicted Functional Partners:
kspS
Putative capsule polysaccharide export protein kpsS.
 
   
 0.941
ctrA
Putative polysaccharide export protein.
 
   
 0.875
kpsC
Putative capsule polysaccharide export protein kpsC.
 
     0.845
ctrD
Capsule polysaccharide export ATP-binding protein ctrD.
 
   
 0.833
ctrB
Putative capsule polysaccharide export inner-membrane protein ctrB.
 
     0.752
ctrC
Putative capsule polysaccharide export inner-membrane protein ctrC.
 
    0.735
GDI2399
Putative glycosyl transferase, group 1.
 
  
  0.710
GDI2401
Putative glycosyl transferase, group 1.
 
  
  0.680
GDI0495
Putative glycosyl transferase.
     
 0.640
gumK
GumK protein.
     
 0.638
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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