Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GDI2489Putative glycosyl transferase, group 1. (332 aa)    
Predicted Functional Partners:
GDI2494
Putative glycosyl transferase.
   
 0.897
exoY
Putative exopolysaccharide production protein exoY.
  
 
 0.779
GDI2488
Hypothetical protein.
       0.773
exoF
Putative exopolysaccharide production protein exoF.
 
 
 0.738
GDI2497
Putative glycosyl transferase.
 
    0.736
GDI2401
Putative glycosyl transferase, group 1.
 
   
 0.735
GDI2412
Putative glycosyl transferase, group 1.
 
   
 0.726
GDI2499
Putative O-antigen transporter.
 
    0.704
GDI2491
Conserved hypothetical protein.
 
     0.654
glgB
Putative 1,4-alpha-glucan branching enzyme 1; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.650
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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