STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exoFPutative exopolysaccharide production protein exoF. (200 aa)    
Predicted Functional Partners:
exoP
Putative succinoglycan biosynthesis transport protein exoP.
 
 0.999
GDI2493
Putative succinoglycan biosynthesis transport protein.
 
 0.964
GDI2491
Conserved hypothetical protein.
 
  
  0.940
gumD
Putative polysaccharide biosynthesis glycosyltransferase.
 
 
 0.940
exoY
Putative exopolysaccharide production protein exoY.
 
 
 0.910
gumJ
Putative lipopolysaccharide biosynthesis protein.
 
  
 0.900
ctrD
Capsule polysaccharide export ATP-binding protein ctrD.
  
  
 0.827
capD
Putative capsular polysaccharide biosynthesis protein capD.
  
 
 0.821
exoO
Putative succinoglycan biosynthesis protein exoO.
 
  
 0.798
gumM
Putative glycosyl transferase; Belongs to the glycosyltransferase 26 family.
 
  
 0.794
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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