Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
potDPutative spermidine/putrescine-binding periplasmic protein precursor. (364 aa)    
Predicted Functional Partners:
GDI1598
Putative ABC-transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.952
GDI2590
Putative signalling protein, GGDEF family.
       0.773
GDI1597
Putative extracellular solute-binding protein, PotD/PotF family.
     
 0.682
GDI2637
Sugar uptake ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.632
nifH
Nitrongenase reductase Fe protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
      
 0.622
tolC
Putative Outer membrane protein tolC precursor.
      
 0.618
cysA
Putative sulfate/thiosulfate import ATP-binding protein cysA.
 
  
  0.563
cysU
Putative sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 
  0.473
GDI2635
Putative transporter protein.
    
  0.469
GDI2823
Conserved hypothetical protein.
    
  0.469
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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