STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI2593Putative Antibiotic biosynthesis monooxygenase. (97 aa)    
Predicted Functional Partners:
ctaE
Putative cytochrome c oxidase subunit 3.
     
 0.888
GDI2594
Putative membrane protein.
       0.723
ctaD-2
Putative cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
       0.723
ctaC
Putative cytochrome c oxidase subunit 2 precursor.
       0.723
lsdA
Levansucrase precursor (EC 2.4.1.10) (Beta-D-fructofuranosy transferase) (Sucrose 6-fructosyl transferase); Belongs to the glycosyl hydrolase 68 family.
  
   
 0.688
GDI1697
Putative flagellar hook-associated protein.
  
     0.618
ilvH
Putative acetolactate synthase isozyme III small subunit.
     
 0.615
GDI0018
Nitrilase/cyanide hydratase.
      
 0.613
ilvI
Putative acetolactate synthase isozyme III large subunit.
      
 0.613
aldA
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.613
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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