Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GDI0249 | metN | GDI0249 | GDI2655 | Putative dipeptide transport system permease protein. | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.889 |
| GDI0653 | GDI3310 | GDI0653 | GDI3310 | Putative transcriptional regulator, mntR family. | Putative NADH-quinone oxidoreductase chain B. | 0.908 |
| GDI0653 | metN | GDI0653 | GDI2655 | Putative transcriptional regulator, mntR family. | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.910 |
| GDI1306 | metH | GDI1306 | GDI3502 | Conserved hypothetical protein. | Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.996 |
| GDI1306 | metN | GDI1306 | GDI2655 | Conserved hypothetical protein. | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.754 |
| GDI3310 | GDI0653 | GDI3310 | GDI0653 | Putative NADH-quinone oxidoreductase chain B. | Putative transcriptional regulator, mntR family. | 0.908 |
| GDI3310 | metN | GDI3310 | GDI2655 | Putative NADH-quinone oxidoreductase chain B. | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.909 |
| GDI3840 | metN | GDI3840 | GDI2655 | Putative ABC transporter component. | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.921 |
| cydC | metN | GDI1747 | GDI2655 | Putative transport ATP-binding protein cydC. | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.904 |
| metF | metH | GDI2575 | GDI3502 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.998 |
| metF | metN | GDI2575 | GDI2655 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.754 |
| metF | metQ | GDI2575 | GDI2654 | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | Putative D-methionine-binding lipoprotein metQ; Belongs to the nlpA lipoprotein family. | 0.425 |
| metH | GDI1306 | GDI3502 | GDI1306 | Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Conserved hypothetical protein. | 0.996 |
| metH | metF | GDI3502 | GDI2575 | Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.998 |
| metH | metN | GDI3502 | GDI2655 | Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.931 |
| metH | metQ | GDI3502 | GDI2654 | Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Putative D-methionine-binding lipoprotein metQ; Belongs to the nlpA lipoprotein family. | 0.464 |
| metI | metN | GDI2656 | GDI2655 | Putative D-methionine transport system permease protein metI. | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
| metI | metQ | GDI2656 | GDI2654 | Putative D-methionine transport system permease protein metI. | Putative D-methionine-binding lipoprotein metQ; Belongs to the nlpA lipoprotein family. | 0.999 |
| metN | GDI0249 | GDI2655 | GDI0249 | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Putative dipeptide transport system permease protein. | 0.889 |
| metN | GDI0653 | GDI2655 | GDI0653 | Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Putative transcriptional regulator, mntR family. | 0.910 |
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