Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mdlAPutative mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (426 aa)    
Predicted Functional Partners:
GDI2662
Putative amidohydrolases.
 
  
 0.980
GDI2664
Putative short chain dehydrogenase.
 
  
  0.873
GDI2666
Putative fumarylacetoacetate (FAA) hydrolase family.
 
     0.839
fucU
Fucose operon fucU protein; Belongs to the RbsD / FucU family.
 
     0.755
GDI2667
Putative oxidoreductase.
 
  
  0.738
GDI2668
Putative transcriptional regulator, GntR family.
 
   
 0.610
dgoK
Putative 2-dehydro-3-deoxygalactonokinase.
  
 
 0.570
lldD
Putative L-lactate dehydrogenase.
    
 0.509
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
 0.505
GDI0971
Conserved hypothetical protein.
   
   0.471
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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