STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapA-2Dihydrodipicolinate synthase. (232 aa)    
Predicted Functional Partners:
GDI1357
Putative inner membrane amino-acid ABC transporter permease protein.
 0.999
GDI3829
Putative transport protein.
 0.999
GDI2708
Putative membrane protein.
 
 0.987
GDI2710
Putative inner membrane amino-acid ABC transporter permease.
 0.950
artJ
Putative arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family.
 0.916
oppD
Putative peptide ABC transport protein; Belongs to the ABC transporter superfamily.
 
     
0.900
GDI3840
Putative ABC transporter component.
 
  
 
0.874
cysU
Putative sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.853
GDI3123
Putative thiamine transport ATP-binding protein.
 
  
 
0.647
gltB
Putative glutamate synthase [NADPH] large chain precursor.
  
  
 0.590
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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