STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI2710Putative inner membrane amino-acid ABC transporter permease. (219 aa)    
Predicted Functional Partners:
artJ
Putative arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 0.981
GDI1356
Putative ABC transporter protein.
 0.953
GDI3828
Putative ABC transporter.
 0.952
dapA-2
Dihydrodipicolinate synthase.
 0.950
GDI2708
Putative membrane protein.
  
  
  0.849
GDI3829
Putative transport protein.
 
0.717
GDI1357
Putative inner membrane amino-acid ABC transporter permease protein.
 
0.702
GDI2716
Putative transcriptional regulator, GntR family.
 
     0.592
ooxA
Putative opine oxidase subunit A.
 
     0.589
GDI2714
Putative FAD dependent oxidoreductase.
 
     0.581
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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