STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI2718Putative TonB-dependent receptor. (365 aa)    
Predicted Functional Partners:
GDI2719
Putative transposase.
       0.773
GDI2309
Conserved hypothetical protein.
  
    0.747
GDI0207
Putative TonB-dependent receptor.
  
    0.633
GDI2720
Hypothetical protein.
  
    0.597
GDI0557
Putative porin protein.
  
     0.584
GDI1602
Hypothetical membrane protein; Putative Fusaric acid resistance protein.
  
     0.582
GDI1345
Putative fusaric acid resistance.
  
     0.579
GDI0191
Putative TonB-dependent receptor.
  
    0.576
GDI2924
Hypothetical protein.
  
     0.568
GDI1238
Putative PKHD-type hydroxylase.
 
  
 0.567
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.