STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LysR-15Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (304 aa)    
Predicted Functional Partners:
LysR-14
Putative transcriptional regulator, LysR family.
 
     0.855
LysR-13
Putative transcriptional regulator, LysR family.
 
     0.801
GDI2731
Thiamine pyrophosphate enzyme-like TPP-binding.
       0.773
mhpD
Putative 2-keto-4-pentenoate hydratase.
       0.773
GDI2733
Putative transcriptional regulator.
       0.773
LysR-5
Putative transcriptional regulator, family LysR; Belongs to the LysR transcriptional regulatory family.
  
     0.771
LysR-10
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.768
LysR-4
Putative transcriptional regulator LysR; Belongs to the LysR transcriptional regulatory family.
  
     0.766
GDI0208
Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.761
LysR
Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.759
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.