STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI2836Putative autoinducer synthesis protein. (209 aa)    
Predicted Functional Partners:
GDI2837
Putative transcriptional Regulator, LuxR family.
 
 
 0.975
GDI2838
Putative transcriptional regulator, luxR family.
 
 
 0.943
GDI1311
Hypothetical protein.
  
 
 0.935
GDI2275
Putative signalling protein, GGDEF family.
    
  0.717
GDI3665
Putative signalling protein, GGDEF family.
    
  0.717
ntrY
Putatie histidine kinase, nitrogen regulation protein ntrY.
     
 0.622
kdpD
Putative two-component sensor histidine kinase, sensor protein kdpD.
      
 0.614
GDI3079
Putative sensor signal transduction histidine kinase.
      
 0.614
luxR
Putative transcriptional regulatory protein.
      
 0.613
chvG
Putative histidine kinase sensory protein.
      
 0.613
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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