STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI2848Putative multidrug resistance protein. (330 aa)    
Predicted Functional Partners:
GDI2849
Putative multidrug resistance protein.
 
     0.946
GDI2850
Putative multidrug efflux MFS outer membrane protein.
  
  0.846
emrB
Putative multidrug resistance protein B; Belongs to the major facilitator superfamily.
     0.798
MFS
Putative transporter protein.
     0.771
GDI0764
Putative secretion protein, HlyD-family.
  
  
  0.765
GDI1000
Putative multidrug efflux transporter protein.
     0.757
GDI0235
Putative multidrug resistance protein.
     0.752
GDI0349
Putative drug resistance transporter; Belongs to the major facilitator superfamily.
     0.595
GDI3720
Putative transmembrane transport protein.
   
   0.588
GDI3721
Putative transmembrane transport protein.
   
   0.588
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.