Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GDI2880Conserved hypothetical protein. (354 aa)    
Predicted Functional Partners:
GDI2879
Conserved hypothetical protein.
 
     0.861
GDI0089
Conserved hypothetical protein.
  
     0.775
GDI2808
Conserved hypothetical protein.
  
     0.775
GDI2809
Conserved hypothetical protein.
  
     0.775
parB-2
Putative chromosome partitioning protein parB.
 
     0.773
GDI2813
Putative ParB-like nuclease.
 
     0.772
GDI0953
Conserved hypothetical protein.
 
     0.771
GDI0091
Putative membrane protein.
  
     0.662
GDI0096
Conserved hypothetical protein.
  
     0.582
GDI0403
Conserved hypothetical protein.
  
     0.574
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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