Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GDI2932Putative permease. (402 aa)    
Predicted Functional Partners:
GDI2933
Putative permease.
 
 0.998
GDI3326
Putative membrane protein.
 
 0.982
GDI2118
Putative ABC transporter ATP-binding protein in rpoN region.
 
 
 0.979
GDI0631
Putative membrane protein.
  
 0.924
GDI2935
Conserved hypothetical protein.
 
     0.924
GDI3325
Putative permease.
  
  
 
0.899
GDI2930
Putative diacylglycerol kinase (DAG) catalytic domain protein.
 
     0.888
GDI2929
Conserved hypothetical protein.
 
     0.881
GDI2934
Putative fatty acid hydroxylase.
 
     0.854
GDI2936
Putative glycosyl transferase.
 
     0.816
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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