STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI3113Conserved hypothetical protein. (185 aa)    
Predicted Functional Partners:
GDI3114
Putative cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.675
GDI3112
Putative alpha/beta hydrolase; Belongs to the peptidase S33 family.
       0.565
treZ
Putative malto-oligosyltrehalose trehalohydrolase.
  
    0.559
GDI3521
Conserved hypothetical protein.
 
    0.540
GDI0636
Conserved hypothetical protein.
 
    0.529
glgX
Putative glycogen operon protein glgX; Belongs to the glycosyl hydrolase 13 family.
   
    0.430
treY
Maltooligosyl trehalose synthase.
  
    0.427
GDI3111
Conserved hypothetical protein.
       0.425
mtfA
Putative RNA 2'-O-ribose methyltransferase mtfA.
       0.422
GDI0169
Putative DNA ligase-like protein.
 
    0.416
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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