Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Experiments
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[Homology]
Score
GDI3121Putative sugar transporter. (451 aa)    
Predicted Functional Partners:
mtnK
Putative kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.
       0.752
GDI1316
Putative sodium symporter protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.605
GDI3120
Hypothetical protein.
       0.572
GDI3123
Putative thiamine transport ATP-binding protein.
       0.555
GDI2515
Putative sodium/substrate symport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.499
GDI3048
Puative glycosyl hydrolase protein.
 
     0.474
metH
Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
  0.466
GDI2620
Putative 4Fe-4S ferredoxin, iron-sulfur binding; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.452
bedA
Putative benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit.
     
  0.452
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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