STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI3152Putative 4-amino-4-deoxy-L-arabinose transferase. (488 aa)    
Predicted Functional Partners:
GDI3153
Putative Dolichol-phosphate mannosyltransferase.
 
 0.995
AsnC-3
Putative transcriptional regulator, AsnC family.
       0.752
GDI1176
Putative glycosyl transferase.
 
 
  0.627
GDI3244
Putative lipid A biosynthesis lauroyl acyltransferase.
 
  
 0.587
trxB-2
Thioredoxin reductase.
       0.537
GDI0932
Hypothetical protein.
  
     0.528
GDI1883
Conserved protein.
  
  
  0.509
GDI1175
Conserved hypothetical protein.
 
     0.502
GDI0739
Conserved hypothetical protein.
  
     0.455
GDI3371
Putative glycosyl transferase.
  
 
 0.449
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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