Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GDI3207Putative oxidoreductase protein. (223 aa)    
Predicted Functional Partners:
GDI3213
Conserved hypothetical protein.
     0.979
GDI3206
Conserved hypothetical protein.
 
     0.821
bedA
Putative benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit.
    
 0.792
gltB
Putative glutamate synthase [NADPH] large chain precursor.
     
  0.703
GDI2620
Putative 4Fe-4S ferredoxin, iron-sulfur binding; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.640
pncA
Pyrazinamidase/nicotinamidase.
       0.514
GDI3205
Putative transcriptional regulator.
       0.473
cyp
Putative cytochrome P450.
  
  
 0.462
GDI3209
Putative lipoprotein.
 
     0.458
fxdB
Putative 2Fe-2S ferredoxin.
 
 
 0.448
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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