STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI3213Conserved hypothetical protein. (280 aa)    
Predicted Functional Partners:
GDI3207
Putative oxidoreductase protein.
     0.979
bedA
Putative benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit.
    
 0.793
GDI3211
Putative amino acid transporter; Belongs to the binding-protein-dependent transport system permease family.
 
     0.697
GDI3209
Putative lipoprotein.
 
     0.679
GDI3210
Putative ABC transporter.
       0.655
GDI3212
Putative amino acid transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.655
GDI2377
Putative Ubiquinol-cytochrome c reductase.
  
     0.625
GDI2396
Putative fatty acid synthase.
    
 0.604
GDI3206
Conserved hypothetical protein.
 
     0.554
sdhA
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
 0.419
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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