Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GDI3449Putative bacterioferritin. (79 aa)    
Predicted Functional Partners:
BFR
Bacterioferritin; Belongs to the bacterioferritin family.
  
 
 0.941
bedA
Putative benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit.
  
 
 0.920
GDI2684
Putative ferritin-like domain.
  
 
 0.793
ctaC
Putative cytochrome c oxidase subunit 2 precursor.
     
  0.711
nifU
Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
    
 0.706
GDI0860
Puative alcohol dehydrogenase cytochrome c subunit precursor.
     
  0.705
exbB
Biopolymer transport exbB protein.
   
  
 0.694
GDI2217
Ferredoxin--NADP reductase.
      
 0.667
GDI3222
Putative transporter protein.
    
 0.628
mntH
Putative manganese transport protein mntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.621
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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