STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI3645Conserved hypothetical protein. (407 aa)    
Predicted Functional Partners:
oprB-4
Putative carbohydrate-selective porin.
 
     0.915
GDI0650
Putative iron permease protein.
 
  
 0.893
GDI3644
Conserved hypothetical protein.
       0.813
GDI3646
Putative membrane protein.
       0.773
flaC
Putative flagellin C; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   
 0.738
GDI1754
Conserved hypothetical protein.
  
    0.683
nifH
Nitrongenase reductase Fe protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
      
 0.613
GDI1733
Acetoin(diacetyl) reductase.
      
 0.613
budA
Acetoin(diacetyl) reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.613
GDI3642
Putative Acetyltransferase.
       0.506
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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