STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BFRBacterioferritin; Belongs to the bacterioferritin family. (162 aa)    
Predicted Functional Partners:
GDI3449
Putative bacterioferritin.
  
 
 0.976
hemH
Ferrochelatase protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.866
copA
Putative copper resistance protein A.
   
 
 0.855
GDI1683
Hypothetical protein.
   
  
 0.693
GDI3695
Hypothetical protein.
       0.664
GDI3696
Hypothetical protein.
       0.664
GDI3697
Hypothetical protein.
       0.664
cheA-2
Putative chemotaxis protein cheA.
   
  
 0.641
pstA
Putative phosphate transport system permease protein.
      
 0.621
flgD
Putative basal-body rod modification protein flgD; Required for flagellar hook formation. May act as a scaffolding protein.
      
 0.616
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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