Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GDI3707Putative signalling protein, GGDEF family. (974 aa)    
Predicted Functional Partners:
GDI3812
Putative signalling protein, GGDEF family.
 
0.976
mcpA-2
Putative chemoreceptor mcpA.
   
 0.972
GDI1867
Putative signalling protein, GGDEF family.
 
0.966
GDI3708
Conserved hypothetical protein.
     0.966
GDI3640
Putative signalling protein, GGDEF family.
 
0.965
GDI1168
Conserved protein.
 
0.930
GDI3168
Putative signalling protein, GGDEF family.
 
0.925
GDI3286
Putative two-component sensor histidine kinase/response regulator hybrid protein.
  
 
 0.918
cheA-2
Putative chemotaxis protein cheA.
    
 0.911
GDI3665
Putative signalling protein, GGDEF family.
 
 
0.853
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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