Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ttgFPutative outer membrane efflux protein. (494 aa)    
Predicted Functional Partners:
acrB
Putative acriflavine resistance protein B.
 
  0.911
GDI3839
Putative secretion protein, HlyD-family.
 
 0.881
acrA
Putative acriflavine resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.831
GDI3840
Putative ABC transporter component.
     
 0.791
GDI3416
Outer membrane efflux protein.
  
  
 
0.570
mdtA-2
Putative multidrug resistance protein mdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.556
GDI3368
Outer membrane protein.
  
  
 
0.555
GDI3850
Secretion protein, HlyD-family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.553
emrA
Multidrug resistance protein A.
  
  0.548
mdtB
Putative multidrug resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
  0.529
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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