STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtB-3Putative multidrug resistance protein mdtB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1057 aa)    
Predicted Functional Partners:
GDI3850
Secretion protein, HlyD-family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.984
mdtA
Putative multidrug resistance protein mdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.926
GDI3417
Putative transporter protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.921
oprJ-2
Outer membrane protein.
  0.887
mdtA-2
Putative multidrug resistance protein mdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.820
GDI2437
Secretion protein, HlyD-family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.809
GDI0143
Putative secretion protein, HlyD-family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.707
acrA
Putative acriflavine resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
  0.646
secD
Putative protein-export membrane protein secD.
  
  
 0.624
tolC
Putative Outer membrane protein tolC precursor.
    
  0.606
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.