Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GDI1189 | GDI1190 | GDI1189 | GDI1190 | Putative ATPase protein; Displays ATPase and GTPase activities. | Putative HPr kinase. | 0.741 |
GDI1189 | GDI1437 | GDI1189 | GDI1437 | Putative ATPase protein; Displays ATPase and GTPase activities. | Putative ribonuclease. | 0.919 |
GDI1189 | glmM | GDI1189 | GDI0812 | Putative ATPase protein; Displays ATPase and GTPase activities. | Putative phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.609 |
GDI1189 | glmU | GDI1189 | GDI1777 | Putative ATPase protein; Displays ATPase and GTPase activities. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | 0.599 |
GDI1189 | ilvE | GDI1189 | GDI1184 | Putative ATPase protein; Displays ATPase and GTPase activities. | Putative branched-chain-amino-acid aminotransferase (ec 2.6.1.42 (transaminase b) (bcat). | 0.773 |
GDI1189 | manX | GDI1189 | GDI1188 | Putative ATPase protein; Displays ATPase and GTPase activities. | Putative phosphotransferase enzyme IIA. | 0.820 |
GDI1189 | pabB | GDI1189 | GDI1185 | Putative ATPase protein; Displays ATPase and GTPase activities. | Putative Para-aminobenzoate synthase. | 0.773 |
GDI1189 | ptsI | GDI1189 | GDI1186 | Putative ATPase protein; Displays ATPase and GTPase activities. | Putative phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.820 |
GDI1189 | ptsO | GDI1189 | GDI1187 | Putative ATPase protein; Displays ATPase and GTPase activities. | Putative phosphoryl transfer system, HPr. | 0.874 |
GDI1189 | rne | GDI1189 | GDI2343 | Putative ATPase protein; Displays ATPase and GTPase activities. | Putative ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.919 |
GDI1190 | GDI1189 | GDI1190 | GDI1189 | Putative HPr kinase. | Putative ATPase protein; Displays ATPase and GTPase activities. | 0.741 |
GDI1190 | ilvE | GDI1190 | GDI1184 | Putative HPr kinase. | Putative branched-chain-amino-acid aminotransferase (ec 2.6.1.42 (transaminase b) (bcat). | 0.667 |
GDI1190 | manX | GDI1190 | GDI1188 | Putative HPr kinase. | Putative phosphotransferase enzyme IIA. | 0.832 |
GDI1190 | pabB | GDI1190 | GDI1185 | Putative HPr kinase. | Putative Para-aminobenzoate synthase. | 0.615 |
GDI1190 | ptsI | GDI1190 | GDI1186 | Putative HPr kinase. | Putative phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.835 |
GDI1190 | ptsO | GDI1190 | GDI1187 | Putative HPr kinase. | Putative phosphoryl transfer system, HPr. | 0.831 |
GDI1437 | GDI1189 | GDI1437 | GDI1189 | Putative ribonuclease. | Putative ATPase protein; Displays ATPase and GTPase activities. | 0.919 |
GDI1437 | rne | GDI1437 | GDI2343 | Putative ribonuclease. | Putative ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.742 |
glmM | GDI1189 | GDI0812 | GDI1189 | Putative phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | Putative ATPase protein; Displays ATPase and GTPase activities. | 0.609 |
glmM | glmU | GDI0812 | GDI1777 | Putative phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | 0.998 |
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