STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accC2Carbamoyl phosphate synthase L chain. (616 aa)    
Predicted Functional Partners:
accA
acetyl-CoA carboxylase alpha subunit.
 
 0.997
accA-2
acetyl-CoA carboxylase alpha subunit.
 
 0.995
leuA2
2-isopropylmalate synthase 2.
  
 
 0.966
rrnAC0003
Unknown.
    
 0.955
pccB
propionyl-CoA carboxylase beta subunit.
 
 0.954
birA
biotin-(acetyl-CoA carboxylase) ligase.
  
 0.941
acaB3
3-ketoacyl-CoA thiolase.
  
 0.939
acaB4
3-ketoacyl-CoA thiolase.
  
 0.939
aca2
acetyl-coA acetyltransferase.
  
 0.939
pdhC2
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.939
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.