STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC0048ABC transporter ATP-binding protein. (313 aa)    
Predicted Functional Partners:
rrnAC0049
ABC transporter ATP-binding domain.
 
  
 0.954
yadH
ABC transporter permease protein.
  
 0.708
nosY1
ABC-type transport system involved in multi-copper enzyme maturation permease component.
  
 
 0.650
rrnAC1656
Nitrite/nitrate reduction protein.
  
 
 0.650
nosY2
ABC-type transport system involved in multi-copper enzyme maturation permease component.
  
 
 0.650
rrnAC0047
Unknown.
       0.622
rbsA-2
Sugar ABC transporter ATP binding protein.
 
    
0.586
rpl14P
50S ribosomal protein L14P; Forms part of two intersubunit bridges in the 70S ribosome (By similarity). Binds to 23S rRNA; Belongs to the universal ribosomal protein uL14 family.
 
 
   0.538
rps11P
30S ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
  
     0.529
nosZ
Nitrous-oxide reductase.
  
 
 0.524
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.