STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ferBFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (109 aa)    
Predicted Functional Partners:
sdhA1
Succinate dehydrogenase flavoprotein subunit.
 
 
 0.885
etfB2
Electron transfer flavoprotein beta subunit.
 
 
 
 0.884
sdhA2
Succinate dehydrogenase flavoprotein subunit.
  
 
 0.864
etfB1
Electron transfer flavoprotein beta subunit.
   
 
 0.755
sdhC
Succinate dehydrogenase subunit C.
 
  
 0.736
sodA
Superoxide dismutase [Mn] 2; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
  
  
 0.719
lipC
Lipase/esterase.
       0.626
prp1
Phosphate regulatory protein-like.
  
     0.597
ydiS
Flavoprotein probably electron transport.
 
     0.593
prp3
Phosphate regulatory protein-like.
  
     0.587
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.