Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hat-1Acetyl transferase GNAT family. (243 aa)    
Predicted Functional Partners:
ydiS
Flavoprotein probably electron transport.
 
     0.693
etfB2
Electron transfer flavoprotein beta subunit.
 
     0.666
etfA1
Electron transfer flavoprotein alpha subunit.
 
     0.646
rrnAC0095
Unknown.
       0.629
ferB
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
     0.541
prxS
AhpC/TSA family peroxiredoxins PrxS.
 
     0.486
rrnAC1351
Putative sugar transporter.
 
 
   0.428
rrnAC2250
Unknown.
  
     0.417
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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