STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrnAC0213Unknown. (241 aa)    
Predicted Functional Partners:
maeB
NAD-dependent malate dehydrogenase.
 
  
 0.702
htpX5
Probable protease HtpX homolog 2.
  
  
 0.640
htpX6
Probable protease HtpX homolog 2.
  
  
 0.640
htpX1
Probable protease htpX-like; Belongs to the peptidase M48B family.
  
  
 0.640
htpX3
Heat shock protein X.
  
  
 0.640
htpX4
Protease heat shock protein HtpX.
  
  
 0.640
nso
Transporter sodium/sulfate symporter family.
 
   0.499
arsB
Arsenite transport protein.
 
   0.499
mct
Unknown; Involved in the methylaspartate cycle. Catalyzes the transfer of the CoA moiety from succinyl-CoA to mesaconate to generate mesaconyl-CoA (2-methylfumaryl-CoA) and succinate. Belongs to the CoA-transferase III family.
  
  
 0.471
rrnAC2632
Sodium symporter transmembrane region.
 
   0.469
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.