STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catCationic amino acid transporter. (484 aa)    
Predicted Functional Partners:
aglA1
Alpha-glucosidase.
  
 0.837
malA
Putative alpha-D-14-glucosidase.
  
 0.837
amy
Alpha amylase.
  
 0.837
trkA4
Trk potassium uptake system protein.
     
 0.821
pknA1
Serine/threonine-protein kinase PknA.
  
 
 0.719
trkA7
TRK potassium uptake system protein.
     
 0.557
argD
Acetylornithine aminotransferase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily.
  
 
 0.462
nhaC6
Na+/H+ antiporter.
   
 
 0.452
mthK
Potassium channel related protein.
   
 
 0.452
panF
Pantothenate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
 
 0.440
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.