STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcS-2ABC transporter permease protein. (377 aa)    
Predicted Functional Partners:
yvrO-2
ABC transporter ATP-binding protein.
 
 0.996
rrnAC0666
ABC transporter ATP-binding protein.
 
 0.985
rrnAC1029
ABC transporter ATP-binding protein.
 
 0.975
rrnAC0250
Unknown.
  
    0.879
pfk3
Phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
       0.581
glnQ1
Glutamine ABC transporter ATP-binding protein.
     0.560
secD
Protein-export membrane protein SecD; Involved in protein export.
  
   
 0.467
phnC2
Phosphonates ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     0.448
glnQ2
Glutamine ABC transporter; ATP-binding protein.
     0.426
fecE
Iron (III) ABC transporter ATP-binding protein.
 
  
 0.423
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.