STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htr-3MCP domain signal transducer; Membrane protein. (640 aa)    
Predicted Functional Partners:
lbp
Leucine-binding protein.
 
     0.800
cheW2
Chemotaxis signal transduction protein CheW.
 
 
 0.767
cheC1
Chemotaxis protein CheC.
 
 
 0.753
cheA1
CheA histidine kinase; Chemotaxis protein.
 
 
 0.716
cheW1
Chemotaxis protein CheW.
  
 
 0.712
sop1
Sensory rhodopsin I; Photoattractant rhodopsin; Belongs to the archaeal/bacterial/fungal opsin family.
  
 
 
 0.663
sop2
Sensory rhodopsin 1; Mediates the photorepellent response.
  
 
 
 0.658
htr-2
Heme-based aerotactic transducer HemAT.
 
   
 0.627
cheA2
CHEA histidine kinase; Chemotaxis protein.
 
 
 0.622
cheC2
Chemotaxis protein CheC.
 
 
 0.617
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.